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Discrete and Topological Models in Molecular Biology Abstracts

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  NameTitle
1ViewAgbandje-McKenna, Mavis
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Defining VP-VP interactions that drive capsid assembly for Adeno-associated Viruses
2ViewBuck, Dorothy
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The Classification of Rational Subtangle Replacements, with Applications to Complex Nucleoprotein Assemblies
3ViewCarbone, Alessandra
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Combinatorial methods to extract co-evolution signals among residues in proteins
4ViewCraciun , Gheorghe
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Graph-theoretic criteria for multistability and persistence in biological networks
5ViewDarcy, Isabel
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DNA knot distances
6ViewDiao, Yuanan
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Generating equilateral random polygons in confinement
7ViewDolzhenko, Egor
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STAGR: Software To Annotate Genome Rearrangement
8ViewDrillon, Guénola
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Combinatorics of Chromosomal Rearrangements
9ViewDykeman, Eric
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Using graph theory to identify genome organization and packaging mechanisms in ssRNA viruses
10ViewGoldman, Aaron
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A Systems Biology Approach to the Origin of Life and Early Metabolism
11ViewIndelicato, Giuliana
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Non-icosahedral pathways for the expansion of icosahedral viral capsids: a coarse grained model
12ViewLandweber, Laura
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Radical Genome Architectures in Oxytricha
13ViewLaubenbacher, Reinhard
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Algebraic models in systems biology
14ViewPadberg, Mary Therese
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Exploring the Conformations of Protein-Bound DNA: Adding Geometry to Known Topology
15ViewPoznanovikj, Svetlana
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Asymptotic enumeration of substructures in a stochastic context-free grammar model of RNA folding
16ViewPrusinkiewicz, Przemyslaw
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Constraints of space in plant development
17ViewSavageau, Michael
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A Generic Characterization Of Phenotypic Repertoire
18ViewScharein, Robert
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Computational Knot Theory with KnotPlot
19ViewSchroeder, Susan
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Ensemble of Secondary Structures for Encapsidated Satellite Tobacco Mosaic Virus RNA Consistent with Chemical Probing and Crystallography Constraints
20ViewShimokawa, Koya
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Tangle analysis of unlinking by XerCD-diff-FtsK system
21ViewSitharam, Meera
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Isolating Crucial Interactions in Virus Assembly by Approximate Configurational Entropy using EASAL
22ViewStockley, Peter
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Outwitting the viral machines: A joint challenge for biology, physics and mathematics.
23ViewSwenson, M
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Profiling RNA Secondary Structures
24ViewTwarock, Reidun
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Viruses and Geometry - Where Symmetry meets Function
25ViewValencia, Karin
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Topological characterization of knots and links arising from site-specific recombination on twist knot substrates.
26ViewWolfe, Brian
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NUPACK: Analysis and Design of Nucleic Acid System